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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs56881083 chr1:175705987 C/CA PRHOXNB chr13:28552243-28562774:- 0.75 8.2 6.09E-11 Box Plot
ACC rs56921523 chr17:48102530 G/A PRHOXNB chr13:28552243-28562774:- -0.71 -9.32 1.12E-12 Box Plot
ACC rs57196944 chr8:4006173 T/A PRHOXNB chr13:28552243-28562774:- 0.55 7.79 2.74E-10 Box Plot
ACC rs57231754 chr3:140993544 G/A OR5V1 chr6:29323007-29399744:- 0.63 7.6 5.55E-10 Box Plot
ACC rs57435290 chr13:72504114 T/C PRHOXNB chr13:28552243-28562774:- 0.65 7.92 1.68E-10 Box Plot
ACC rs57498347 chr1:201899753 A/G TM4SF5 chr17:4675179-4686508:+ 0.93 8.08 9.37E-11 Box Plot
ACC rs5750640 chr22:39005870 A/G EPGN chr4:75174190-75181024:+ -1.75 -8.59 1.51E-11 Box Plot
ACC rs57592542 chr2:234246503 C/T PRAMEF6 chr1:12998302-13007406:- 0.67 7.89 1.88E-10 Box Plot
ACC rs5779493 chr1:189740109 TA/T PRHOXNB chr13:28552243-28562774:- 0.58 8.29 4.4E-11 Box Plot
ACC rs57834926 chr10:61348650 G/T GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot
ACC rs57865508 chr3:140993665 G/A OR5V1 chr6:29323007-29399744:- 0.63 7.6 5.55E-10 Box Plot
ACC rs57870156 chr13:105089979 T/G DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs57910436 chr17:32525905 T/C TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs57953618 chr19:19979659 TA/T CXorf61 chrX:115592849-115594164:- 0.59 9.1 2.42E-12 Box Plot
ACC rs58013871 chr19:19984779 G/A CXorf61 chrX:115592849-115594164:- 0.59 9.1 2.42E-12 Box Plot